Installed Software

Reference list of native software modules installed or exposed on NowWhat.

This page lists native modules from /software/modules/linux-rocky9-x86_64/Core. Apptainer-backed modules are documented separately in Apptainer containers.

SoftwareVersionsCategoryDefault
cmake3.31.12Build tools and compilers
gcc11.5.0-ovsdh6e, 13.4.0Build tools and compilers13.4.0
ninja1.13.2Build tools and compilers
cuda13.3.0GPU and CUDA
nccl2.29.7-1GPU and CUDA
openmpi5.0.10MPI and communication
ucx1.22.0MPI and communication
openblas0.3.33Libraries
zlib1.3.2Libraries
bcftools1.23.1Bioinformatics
bwa0.7.19Bioinformatics
fastp1.0.1Bioinformatics
fastqc0.12.1Bioinformatics
minimap22.30Bioinformatics
samtools1.23.1Bioinformatics
star2.7.11bBioinformatics
autoconf2.72Utilities
automake1.18.1Utilities
bedtools22.31.1Utilities
bison3.8.2Utilities
blast-plus2.17.0Utilities
bowtie22.5.4Utilities
cell-ranger10.0Utilities
collectl4.3.20Utilities
curl8.21.0Utilities
ffmpeg8.1Utilities
flex2.6.3Utilities
gmake4.4.1Utilities
htslib1.23.1Utilities
imagemagick7.1.1-39Utilities
jq1.8.2Utilities
libjpeg-turbo3.1.3Utilities
libpng1.6.58Utilities
libtiff4.7.1Utilities
libtool2.5.4Utilities
m41.4.21Utilities
openjpeg2.5.4Utilities
openslide4.0.0Utilities
parallel20240822Utilities20240822
pigz2.8Utilities
pkgconf2.5.1Utilities
rsync3.4.4Utilities
sqlite3.53.1Utilities
texlive2026Utilities
wget1.25.0Utilities
zstd1.5.7Utilities

Environment Manager

ModulePurposePath
micromamba/latestMicromamba environment manager/software/envs/micromamba/bin

Raw Module Discovery

Run this on NowWhat to confirm the live catalogue:

module avail
module --default avail
module overview